Bakta

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

基本信息

属性	值
类别	genome-annotation
难度	⭐⭐ 中级
语言	Python
GitHub Stars	617
标签	annotation, prokaryotic, standardized, UniRef, bioinformatics, microbial-genomics, genome-annotation, bacteria, bacterial-genomes, plasmids, metagenome-assembled-genomes, mag

链接

• 📦 代码仓库: https://github.com/oschwengers/bakta
• 📄 论文: https://doi.org/10.1093/microbe/miac074

安装

pip install bakta

简介

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

使用示例

📝 更多使用示例请参考官方文档。

参考资源

• 📖 官方文档: https://github.com/oschwengers/bakta
• 🎓 教程: https://github.com/oschwengers/bakta#usage
• 📄 论文: Schwengers et al. (2021) Bakta: rapid and standardized annotation of bacterial genomes. Microbial Genomics. DOI: 10.1099/mgen.0.000685

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最后更新: 2026-03-30